Applications
Applications
Efficient identification of SNPs by sequence matching
Graph Matching
Comparison of protein structures and search for proteins with similar structures
Requirements
・ 3D structure comparison algorithms
・ Fast graph matching algorithms
・ Fast parallel searching algorithms
Genome analysis
- Sophisticated graph-based matching algorithms required rather than DP matching
- Speedup of graph matching algorithms by using super-parallel processors GRAPE-DR
Astrophysics
- Planetary formation
- Formation of galaxy, evolution to the present state and future
- Particle simulation with 108particles
- Currently GRAPE-6 is used worldwide
Fluid/Structural analysis by Freemesh method
- No need for mesh-generation, suitable for parallel processing
- Higher accuracy than EFGM or similar methods
